Brownie Bottom Mini Cheesecakes are the ultimate celebration of two classic desserts in one adorable, irresistible package. Imagine biting through a rich, fudgy brownie base into a creamy, tangy cheesecake layer—each bite is a perfect harmony of flavors and textures. These mini treats are not only visually stunning but also delightfully simple to make, earning rave reviews at parties, potlucks, or cozy nights in. Whether you’re a beginner baker or a seasoned pro, this recipe delivers decadent results every time!

Ingredients You’ll Need
You’ll be amazed at how just a handful of simple ingredients transform into the magic of Brownie Bottom Mini Cheesecakes. Each component plays a crucial role, from creating that fudgy foundation to achieving the luscious cheesecake top. Here’s what you need and why it matters:
- Brownie mix (1 box, plus package ingredients): The shortcut to a rich, chocolatey base that pairs perfectly with creamy cheesecake.
- Cream cheese (16 ounces, softened): The heart of the cheesecake layer, providing essential creaminess and tang.
- Granulated sugar (1/2 cup): Sweetens the cheesecake filling just enough to complement the brownie bottom.
- Eggs (2 large, room temperature): Bind the cheesecake filling for a smooth, custardy texture.
- Vanilla extract (1 teaspoon): Enhances flavor and adds warmth to the cheesecake layer.
- Sour cream (1/2 cup): Adds a subtle tang and silkiness to the filling.
- All-purpose flour (1/4 cup): Gives the cheesecake structure so it holds up beautifully when sliced.
- Whipped cream and chocolate sauce (optional): For those picture-perfect, indulgent finishing touches.
How to Make Brownie Bottom Mini Cheesecakes
Step 1: Prep the Pan and Oven
Start by preheating your oven to 350°F (175°C) and lining a 12-cup muffin tin with sturdy paper liners. This step makes removing your Brownie Bottom Mini Cheesecakes a breeze, and ensures they keep their shape beautifully.
Step 2: Make and Bake the Brownie Bottoms
Prepare the brownie batter according to the instructions on your chosen box mix. Then, spoon about one heaping tablespoon of batter into each muffin cup and gently spread it out for an even layer. Bake these brownie bases for 10 minutes—just long enough to set them up, but not fully bake, so they’ll meld perfectly with the cheesecake layer.
Step 3: Whip Up the Cheesecake Batter
While the brownie bottoms bake, it’s time to make the luscious cheesecake topping. Beat the softened cream cheese and sugar together in a large bowl until the mixture is smooth and creamy. Add the eggs one at a time, blending well after each addition. Stir in the vanilla extract, sour cream, and flour, mixing just until everything is combined. This creates a silky, scoopable filling that sits perfectly atop your brownie base.
Step 4: Layer and Bake
Once the brownie bottoms are out of the oven, divide the cheesecake batter evenly among the muffin cups, smoothing the tops as needed. Pop the pan back into the oven and bake for 18 to 20 minutes. You’re looking for the centers to be set but still slightly jiggly—this is the secret to ultra-creamy mini cheesecakes!
Step 5: Cool and Chill
When the baking is done, let the cheesecakes cool in the pan for about 30 minutes. This helps them firm up and makes unmolding easier. Afterward, transfer them to the refrigerator for at least 2 hours (overnight is even better) to achieve that classic, dense cheesecake texture.
Step 6: Garnish and Serve
Before serving, go ahead and add a swirl of whipped cream and a drizzle of chocolate sauce for a bakery-style finish. If you’re feeling adventurous, sprinkle on mini chocolate chips or a dusting of cocoa powder for extra flair!
How to Serve Brownie Bottom Mini Cheesecakes

Garnishes
For a show-stopping presentation, add a generous dollop of whipped cream and a ribbon of chocolate sauce to each cheesecake. Fresh berries, a sprinkle of chopped nuts, or even a few chocolate shavings can elevate them to party-perfect status. The contrast of cool, creamy topping with fudgy and tangy layers makes every bite feel special.
Side Dishes
While these Brownie Bottom Mini Cheesecakes are absolutely the star of any dessert table, pairing them with a bowl of fresh strawberries or raspberries creates a lovely contrast. If you want to go all out, a scoop of vanilla ice cream alongside is pure decadence and balances the richness beautifully.
Creative Ways to Present
Try serving them on a tiered cake stand for a stunning centerpiece at your next gathering. For a playful twist, nestle each mini cheesecake into a colorful cupcake wrapper or place them in individual treat boxes as edible gifts. You can even set up a DIY topping bar with sauces, sprinkles, and fruits to let everyone customize their own!
Make Ahead and Storage
Storing Leftovers
Store any leftover Brownie Bottom Mini Cheesecakes in an airtight container in the refrigerator for up to five days. They actually taste even better after a day or two as the flavors meld together, making them an excellent make-ahead dessert option.
Freezing
To freeze, wrap each mini cheesecake individually in plastic wrap and place them in a freezer-safe bag or container. They’ll keep well for up to two months. When you’re ready to enjoy, just thaw them overnight in the fridge—perfect for last-minute cravings or unexpected guests.
Reheating
These mini cheesecakes are best served chilled, but if you prefer them slightly warmer, let them sit at room temperature for about 15 minutes before serving. Avoid microwaving, as it can alter the creamy texture and cause the brownie base to become soggy.
FAQs
Can I use homemade brownie batter instead of a boxed mix?
Absolutely! If you have a favorite homemade brownie recipe, feel free to use it for the base. Just make sure to prepare enough batter for a thin layer in each muffin cup, so the proportions stay balanced.
Why are my cheesecakes cracking on top?
Cracking can happen if the cheesecakes are overbaked or cooled too quickly. Try baking until just set with a slight jiggle in the center, and let them cool gradually in the pan before moving to the fridge. Even if they do crack, a swirl of whipped cream will cover it right up!
Can I add flavors or mix-ins to the cheesecake batter?
Definitely! Mini chocolate chips, peanut butter swirls, or even a bit of citrus zest can add extra personality. Just fold them gently into the cheesecake batter before layering over the brownie base.
Do I need to use paper liners?
Paper liners make removing and serving Brownie Bottom Mini Cheesecakes much easier, but you can use a well-greased nonstick muffin pan if you prefer. Just be extra gentle when unmolding to preserve those neat layers.
Are these suitable for making ahead for parties?
These mini cheesecakes are a dream for advance prep! They hold up beautifully in the fridge for several days and can even be frozen, so you can make them ahead and focus on enjoying your guests.
Final Thoughts
If you’re looking for a dessert that’s guaranteed to impress and a breeze to make, Brownie Bottom Mini Cheesecakes are it. They’re a crowd-pleaser for any occasion, and you’ll love every decadent, creamy, chocolatey bite. Don’t be surprised when friends and family beg you for the recipe—these little treats truly steal the show!
Print
Brownie Bottom Mini Cheesecakes Recipe
- Total Time: 2 hours 50 minutes
- Yield: 12 mini cheesecakes 1x
- Diet: Vegetarian
Description
These Brownie Bottom Mini Cheesecakes combine rich, fudgy brownie bases with creamy, smooth cheesecake tops to create a decadent handheld dessert perfect for any occasion.
Ingredients
Brownie Base
- 1 box brownie mix (plus ingredients listed on the package)
Cheesecake Filling
- 16 ounces cream cheese, softened
- 1/2 cup granulated sugar
- 2 large eggs, room temperature
- 1 teaspoon vanilla extract
- 1/2 cup sour cream
- 1/4 cup all-purpose flour
Toppings (optional)
- Whipped cream
- Chocolate sauce
Instructions
- Preheat and prepare muffin tin: Preheat your oven to 350°F (175°C) and line a 12-cup muffin tin with paper liners for easy removal and clean-up.
- Prepare brownie batter: Prepare the brownie batter as instructed on the package, ensuring it is mixed thoroughly for a smooth consistency.
- Spoon brownie batter: Spoon about 1 heaping tablespoon of brownie batter into each lined muffin cup and spread it evenly to form the brownie base.
- Bake brownie bottoms: Bake these brownie layers for 10 minutes until partially set, then remove from the oven to prepare the cheesecake topping.
- Make cheesecake filling: In a large bowl, beat softened cream cheese and sugar until smooth and creamy. Add eggs one at a time, mixing well after each addition. Stir in vanilla extract, sour cream, and flour just until combined, being careful not to overmix.
- Assemble cheesecakes: Evenly divide the cheesecake batter over the partially baked brownie bottoms in the muffin tin.
- Bake cheesecakes: Return the pan to the oven and bake for 18–20 minutes, until the cheesecake centers are set but still slightly jiggly to touch.
- Cool and chill: Remove from oven and cool in the pan for 30 minutes, then refrigerate for at least 2 hours or until thoroughly chilled and firm.
- Add toppings and serve: Before serving, optionally top each mini cheesecake with whipped cream and drizzle with chocolate sauce for added indulgence.
Notes
- You can add mini chocolate chips or a swirl of peanut butter into the cheesecake batter to customize the flavor and texture.
- These mini cheesecakes freeze well—wrap each individually and thaw in the refrigerator before serving.
- Prep Time: 20 minutes
- Cook Time: 30 minutes
- Category: Dessert
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 mini cheesecake
- Calories: 280
- Sugar: 22 g
- Sodium: 210 mg
- Fat: 16 g
- Saturated Fat: 9 g
- Unsaturated Fat: 6 g
- Trans Fat: 0 g
- Carbohydrates: 29 g
- Fiber: 1 g
- Protein: 5 g
- Cholesterol: 65 mg