If you’re ready to fall head over heels for fruity baked treats, these Decadent Blackberry Lime Cheesecake Cupcakes deserve a top spot in your dessert rotation! Bursting with creamy cheesecake, swirls of tangy blackberry puree, and the citrusy brightness of fresh lime, each cupcake offers a bite-sized taste of summer. The classic graham cracker crust gives that familiar crunch, and the juicy berry finish makes them impossible to resist. These cupcakes aren’t just beautiful to serve—they’re festive, refreshing, and destined to become a star at any gathering.

Ingredients You’ll Need
The magic of Decadent Blackberry Lime Cheesecake Cupcakes comes down to simple, quality ingredients working in harmony. Each component adds its own spark, whether it’s texture, flavor, or a burst of color in every bite.
- Graham cracker crumbs: The toasty, buttery base keeps everything together and adds a classic cheesecake crunch.
- Unsalted butter (melted): Melted butter binds those crisp graham crumbs and gives the crust a rich, golden finish.
- Sugar (for crust): Just a touch for sweetness; it enhances the crust without overpowering the flavors above it.
- Cream cheese (softened): The creamy heart of every great cheesecake—make sure it’s at room temperature for maximum smoothness.
- Granulated sugar: Sweetens the filling just enough to balance the tart fruit and zingy lime.
- Large eggs: These give structure and that irresistible, custardy texture to the cheesecake filling.
- Sour cream: Adds tang and silkiness, elevating the overall flavor profile.
- Vanilla extract: For depth and warmth; it brings out the cheesecake’s classic richness.
- Zest of 1 lime: Lime zest punches up the citrus aroma and brightens the whole bite.
- Lime juice: Tart and fresh, it partners with the zest to deliver a zippy flavor twist.
- Blackberry purée (strained): The star of the swirl! It infuses the filling with a tangy, deep berry taste and gorgeous color.
- Blackberry jam (optional for topping): Adds an extra pop of gloss and berry flavor if you want to dress things up.
- Fresh blackberries and lime zest (for garnish): For a picture-perfect finish and a final hit of juiciness and citrus.
How to Make Decadent Blackberry Lime Cheesecake Cupcakes
Step 1: Prep Your Pan and Make the Crust
Preheat your oven to 325°F (165°C) and line a 12-cup muffin tin with paper liners. In a small bowl, combine the graham cracker crumbs, melted butter, and a tablespoon of sugar. Mix until everything resembles wet sand, then spoon about a tablespoon of the mixture into each liner. Press firmly to form a compact layer—your fingers or the bottom of a small glass work best. Bake the crusts for 5 minutes, just until set, then let them cool completely while you whip up the filling.
Step 2: Make the Cheesecake Batter
Grab a large mixing bowl and beat your softened cream cheese until it’s utterly smooth and luscious. This step ensures the final cupcakes are creamy without any pesky lumps. Gradually add the granulated sugar and keep beating until the mixture turns light and fluffy. Add your eggs one at a time, mixing well after each, and then gently blend in the sour cream, vanilla extract, lime zest, and lime juice. Your batter should be silky, thick, and speckled with vibrant flecks of lime.
Step 3: Swirl in the Blackberry Puree
Divide your cheesecake batter in half—no need to be exact, just eyeball it. Into one half, fold in the strained blackberry purée until you have a beautifully tinted, fruity mixture. Now, spoon about a tablespoon of the plain lime batter over each cooled crust, followed by a generous spoonful of the blackberry batter. Want that bakery-style marbled look? Drag a toothpick or skewer through both layers to create pretty swirls, just a few gentle strokes will do the trick!
Step 4: Bake to Perfection
Place your muffin tin in the oven and bake for 20 to 22 minutes. Keep a close eye—you’re looking for set edges with the slightest jiggle in the center. Overbaking leads to cracks, so err on the side of just-set. Cool cupcakes in the pan for 10 minutes, then transfer to a wire rack to finish cooling completely before chilling in the fridge for at least 2 hours. This is where their irresistible, creamy texture develops.
Step 5: Top and Garnish
Before serving your Decadent Blackberry Lime Cheesecake Cupcakes, top each one with a glossy spoonful of blackberry jam (if you like a little extra berry punch), a fresh blackberry, and a sprinkle of bright lime zest. These finishing touches turn each cupcake into a mini work of art—almost too pretty to eat, but too delicious not to!
How to Serve Decadent Blackberry Lime Cheesecake Cupcakes

Garnishes
For presentation that wows, top each cupcake with a small swirl of blackberry jam, a single perfect blackberry, and a scattering of lime zest. The jewel tones of the berries and the vivid green from the lime create a dessert that’s as gorgeous as it is mouthwatering. If you want to go all out, a dollop of whipped cream or a mint sprig also adds flair.
Side Dishes
While Decadent Blackberry Lime Cheesecake Cupcakes can certainly shine solo, you can pair them with a bowl of mixed berries or a scoop of tangy lemon sorbet for a refreshing finish. If you’re serving a full dessert spread, consider matching with light shortbread cookies or a citrusy fruit salad for extra brightness on the plate.
Creative Ways to Present
For a party-ready display, arrange your cupcakes on a tiered stand, alternating garnishes for pops of color. You could also serve them in clear cups with layered fresh berries or package individually for the cutest edible gifts. For brunch or a special tea, try presenting them on vintage plates with lacy doilies for that whimsical touch.
Make Ahead and Storage
Storing Leftovers
Once your Decadent Blackberry Lime Cheesecake Cupcakes are thoroughly chilled, store any leftovers in an airtight container in the refrigerator. They’ll stay wonderfully fresh and creamy for up to three days, making them excellent for prepping in advance or snacking whenever your sweet tooth strikes.
Freezing
If you’re planning ahead or want to save some for later, these cupcakes freeze beautifully! Arrange un-garnished cupcakes in a single layer in a freezer-safe container, separated by parchment if needed. Thaw overnight in the refrigerator, and add your fresh toppings just before serving for best results.
Reheating
While Decadent Blackberry Lime Cheesecake Cupcakes are best enjoyed chilled, you can bring them to room temperature for an ultra-creamy texture. Just set the desired number of cupcakes out for 15 to 20 minutes before serving. Avoid microwaving, as it can cause the cheesecake to melt or lose its luscious bite.
FAQs
Can I use frozen blackberries for the purée?
Absolutely! Thaw and drain your frozen blackberries before puréeing and straining. They’re a perfect, budget-friendly option and yield tons of flavor, especially outside of berry season.
How do I prevent my cheesecake cupcakes from cracking?
The key is not to overbake. Remove them from the oven when the centers are just set. Cooling them gradually and chilling for at least two hours also helps set the texture and prevent cracks.
Can I make these gluten-free?
Definitely! Simply swap in gluten-free graham crackers for the crust. Everything else in the recipe is naturally gluten-free, making this an easy adaptation for guests with dietary needs.
Is it okay to skip the blackberry jam topping?
Of course! The jam is optional and mainly adds a glossy finish and extra berry punch. If you prefer a lighter touch, just stick with a fresh blackberry and a little lime zest for garnish.
What’s the best way to achieve the perfect swirl?
After layering the plain and blackberry batters, gently run a toothpick through both mixtures in a zigzag pattern. Aim for just a few swirls—you want distinct colors without fully blending for that classic marbled look.
Final Thoughts
There’s something truly irresistible about Decadent Blackberry Lime Cheesecake Cupcakes—each bite is a burst of creamy, fruity, tangy goodness that’s impossible not to love. Whether you’re sharing them at a spring celebration or keeping them all to yourself for a week of personal treats, you won’t regret whipping up a batch. Go on, give these cupcakes a try and watch them disappear!
Print
Decadent Blackberry Lime Cheesecake Cupcakes Recipe
- Total Time: 2 hours 45 minutes
- Yield: 12 cupcakes 1x
- Diet: Non-Vegetarian
Description
Indulge in the delightful combination of tangy blackberries and zesty lime with these Decadent Blackberry Lime Cheesecake Cupcakes. A perfect dessert for any occasion!
Ingredients
Cupcake Base:
- 1 cup graham cracker crumbs
- 3 tablespoons unsalted butter, melted
- 1 tablespoon sugar
Cheesecake Filling:
- 16 ounces cream cheese, softened
- 1/2 cup granulated sugar
- 2 large eggs
- 1/4 cup sour cream
- 2 teaspoons vanilla extract
- Zest of 1 lime
- 1 tablespoon lime juice
- 1/2 cup blackberry purée, strained
Topping:
- 1/4 cup blackberry jam (optional)
- Fresh blackberries and lime zest for garnish
Instructions
- Preheat and Prepare: Preheat oven to 325°F (165°C) and line a muffin tin. Mix graham cracker crumbs, melted butter, and sugar. Press into liners and bake.
- Mix Cheesecake Filling: Beat cream cheese until smooth. Add sugar, eggs, sour cream, vanilla, lime zest, and lime juice.
- Add Blackberry Flavor: Fold blackberry purée into half the batter. Layer plain and blackberry batter over crusts.
- Bake and Chill: Bake for 20–22 minutes. Cool, then refrigerate for at least 2 hours.
- Final Touches: Top with blackberry jam, fresh blackberries, and lime zest before serving.
Notes
- You can use store-bought or homemade blackberry purée.
- Cupcakes can be made up to two days ahead and stored in the fridge.
- For a gluten-free version, use gluten-free graham crackers.
- Prep Time: 20 minutes
- Cook Time: 22 minutes
- Category: Dessert
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 cupcake
- Calories: 280
- Sugar: 17g
- Sodium: 190mg
- Fat: 19g
- Saturated Fat: 11g
- Unsaturated Fat: 7g
- Trans Fat: 0g
- Carbohydrates: 22g
- Fiber: 1g
- Protein: 4g
- Cholesterol: 75mg